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other:uvcdat:cdat_conda:cdat_2_10 [2017/08/31 12:39]
jypeter Added the clean-up section, and added gdal to the extra package list
other:uvcdat:cdat_conda:cdat_2_10 [2018/10/03 09:56] (current)
jypeter Added windspharm
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     * ''​conda install -c conda-forge gdal''​     * ''​conda install -c conda-forge gdal''​
     * [[https://​pcjericks.github.io/​py-gdalogr-cookbook/​|Python GDAL/OGR Cookbook]]     * [[https://​pcjericks.github.io/​py-gdalogr-cookbook/​|Python GDAL/OGR Cookbook]]
 +  * [[https://​github.com/​stefraynaud/​spanlib|spanlib]]:​ Spectral Analysis Library
 +    * ''​conda install -n cdatm15 -c stefraynaud -c conda-forge spanlib''​
 +    * Test: ''​python -c 'from spanlib.analyzer import Analyzer'​ ''​
 +  * [[http://​wrf-python.readthedocs.io/​en/​latest/​|wrf-python]]:​ A collection of diagnostic and interpolation routines for use with output from the Weather Research and Forecasting (WRF-ARW) Model
 +    * ''​conda install -n cdatm15 -c conda-forge wrf-python''​
 +  * [[https://​glances.readthedocs.io/​en/​stable/​index.html|glances]]:​ a cross-platform monitoring tool (similar to ''​top''​)
 +    * ''​conda install -n cdatm15 -c conda-forge glances''​
 +    * [[https://​github.com/​nicolargo/​glances|glances@github]]
 +  * [[https://​ajdawson.github.io/​windspharm/​latest/​|windspharm]]:​ spherical harmonic wind analysis in Python
 +    * ''​conda install -n cdatm15 -c conda-forge windspharm''​
 +    * [[https://​github.com/​ajdawson/​windspharm|windspharm@github]]
 +
  
 ==== TODO ==== ==== TODO ====
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   * [[http://​www.ifremer.fr/​vacumm/​|vacumm]]:​ Validation, Analysis, Comparison - Utilities written in Python to validate and analyze Multi-Model outputs, and compare them to observations   * [[http://​www.ifremer.fr/​vacumm/​|vacumm]]:​ Validation, Analysis, Comparison - Utilities written in Python to validate and analyze Multi-Model outputs, and compare them to observations
     * As of August 08 2017, installing vacumm in 2.10 requires downgrading to 2.10 (see [[https://​github.com/​VACUMM/​vacumm/​issues/​9|github issue]])!     * As of August 08 2017, installing vacumm in 2.10 requires downgrading to 2.10 (see [[https://​github.com/​VACUMM/​vacumm/​issues/​9|github issue]])!
 +    * <wrap hi>​Problem solved</​wrap>​ with **vacumm 3.4.1-1** on August 31st! Installation was OK with\\ ''​conda install -n cdatm15 -c conda-forge -c vacumm vacumm''​
  
   * Install PySPLIT for Sentia\\ [[https://​github.com/​mscross/​pysplit|PySPLIT]] A package for generating HYSPLIT air parcel trajectories trajectories,​ performing moisture uptake analyses, expediting HYSPLIT cluster analysis, and for visualizing trajectories,​ clusters, and along-trajectory meteorological data\\ Works with [[https://​ready.arl.noaa.gov/​HYSPLIT.php|HYSPLiT]]   * Install PySPLIT for Sentia\\ [[https://​github.com/​mscross/​pysplit|PySPLIT]] A package for generating HYSPLIT air parcel trajectories trajectories,​ performing moisture uptake analyses, expediting HYSPLIT cluster analysis, and for visualizing trajectories,​ clusters, and along-trajectory meteorological data\\ Works with [[https://​ready.arl.noaa.gov/​HYSPLIT.php|HYSPLiT]]
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   * NO such packages now!   * NO such packages now!
 +
 +==== Updating some packages ====
 +
 +Some packages change more often than others, and can be easily updated the following way:
 +
 +  * [[https://​cmor.llnl.gov/​|CMOR]]
 +    * Update with: ''​conda update -n cdatm15 -c conda-forge -c pcmdi -c uvcdat cmor''​
 +      * Get version number with: ''​python -c 'from cmor import *; print CMOR_VERSION_MAJOR,​ CMOR_VERSION_MINOR,​ CMOR_VERSION_PATCH'​ ''​
 +
 +  * [[https://​earthsystemcog.org/​projects/​wip/​CMIP6DataRequest|dreqPy]]
 +    * Update with: ''​pip install %%--%%upgrade dreqPy''​
 +      * Get version number with: ''​drq -v''​
  
 ==== Cleaning up things ==== ==== Cleaning up things ====
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   * [[http://​pythonhosted.org/​seawater/​|seawater]]:​ Python re-write of the CSIRO seawater toolbox   * [[http://​pythonhosted.org/​seawater/​|seawater]]:​ Python re-write of the CSIRO seawater toolbox
   * [[https://​pypi.python.org/​pypi/​gsw/​|gsw]]:​ Python implementation of the Thermodynamic Equation Of Seawater   * [[https://​pypi.python.org/​pypi/​gsw/​|gsw]]:​ Python implementation of the Thermodynamic Equation Of Seawater
 +  * [[http://​www.ifremer.fr/​vacumm/​|vacumm]]:​ Validation, Analysis, Comparison - Utilities written in Python to validate and analyze Multi-Model outputs, and compare them to observations
   * [[http://​unidata.github.io/​netcdf4-python/​|netcdf4]]:​ a Python interface to the netCDF C library   * [[http://​unidata.github.io/​netcdf4-python/​|netcdf4]]:​ a Python interface to the netCDF C library
   * [[http://​ferret.pmel.noaa.gov/​Ferret/​documentation/​pyferret|pyferret]]:​ Ferret encapsulated in    * [[http://​ferret.pmel.noaa.gov/​Ferret/​documentation/​pyferret|pyferret]]:​ Ferret encapsulated in 
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   * [[http://​scitools.org.uk/​iris/​index.html|iris]]:​ A Python library for Meteorology and Climatology   * [[http://​scitools.org.uk/​iris/​index.html|iris]]:​ A Python library for Meteorology and Climatology
   * [[http://​www.gdal.org/​|OSGeo/​GDAL]]:​ Geospatial Data Abstraction Library. GDAL is a translator library for raster and vector geospatial data formats   * [[http://​www.gdal.org/​|OSGeo/​GDAL]]:​ Geospatial Data Abstraction Library. GDAL is a translator library for raster and vector geospatial data formats
 +  * [[https://​github.com/​stefraynaud/​spanlib|spanlib]]:​ Spectral Analysis Library
 +  * [[http://​wrf-python.readthedocs.io/​en/​latest/​|wrf-python]]:​ A collection of diagnostic and interpolation routines for use with output from the Weather Research and Forecasting (WRF-ARW) Model
 +  * [[https://​glances.readthedocs.io/​en/​stable/​index.html|glances]]:​ a cross-platform monitoring tool (similar to ''​top''​)
 +  * [[https://​ajdawson.github.io/​windspharm/​latest/​|windspharm]]:​ spherical harmonic wind analysis in Python
  
 ==== Removed packages ==== ==== Removed packages ====
other/uvcdat/cdat_conda/cdat_2_10.1504183193.txt.gz · Last modified: 2017/08/31 12:39 by jypeter