other:uvcdat:cdat_conda:climaf_test
Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision Next revision | Previous revision | ||
|
other:uvcdat:cdat_conda:climaf_test [2019/03/13 17:34] jypeter |
other:uvcdat:cdat_conda:climaf_test [2019/05/14 15:08] (current) jypeter |
||
|---|---|---|---|
| Line 14: | Line 14: | ||
| * <code>cd somewhere/Notebooks/TP_CliMAF | * <code>cd somewhere/Notebooks/TP_CliMAF | ||
| jupyter notebook --no-browser</code> | jupyter notebook --no-browser</code> | ||
| + | * You can also explicitly specify a port (e.g. use the one associated with your account in ''/ciclad-home/jservon/Evaluation/CliMAF/climaf_installs/climaf_1.2.10/bin/cmip6.notebook.txt'') with\\ ''jupyter notebook %%--%%no-browser %%--%%port=pppp_number'' | ||
| * Write down the connection URL and token: ''http://localhost:8888/?token=9f7682071ab5d6a3e...'' | * Write down the connection URL and token: ''http://localhost:8888/?token=9f7682071ab5d6a3e...'' | ||
| * The port number may be different from the default ''8888'' | * The port number may be different from the default ''8888'' | ||
| - | * At the end, kill the server by typing ''^C^C'' (2x ''CTRL-C'') | + | * When you are finished, <wrap em>do not forget to kill the ipython server</wrap> by typing ''^C^C'' (2x ''CTRL-C'') |
| * At LSCE (or on the Windows machine where you will run the browser connecting to the server on ciclad) | * At LSCE (or on the Windows machine where you will run the browser connecting to the server on ciclad) | ||
| Line 36: | Line 37: | ||
| * Open a shell and type: ''ssh -L 8000:localhost:8888 your_login@ciclad.ipsl.jussieu.fr'' | * Open a shell and type: ''ssh -L 8000:localhost:8888 your_login@ciclad.ipsl.jussieu.fr'' | ||
| * In a browser, open the URL <wrap em>with the corrected 8000 port</wrap> ''http://localhost:8000/?token=9f7682071ab5d6a3e...'' | * In a browser, open the URL <wrap em>with the corrected 8000 port</wrap> ''http://localhost:8000/?token=9f7682071ab5d6a3e...'' | ||
| + | |||
| + | ===== Notes to clean ===== | ||
| + | |||
| + | <code>/ciclad-home/jservon/Evaluation/CliMAF/climaf_installs/climaf_1.2.10/bin/climaf-notebook | ||
| + | |||
| + | Login to ciclad | ||
| + | Start an interactive session on a cluster node: qsub -IVX -l mem=9g,vmem=9g,walltime=06:00:00 | ||
| + | dig a tunnel from local machine to node: ssh -L 7225:cicladNNN:7225 jypmce@ciclad2.ipsl.jussieu.fr | ||
| + | init conda environment: conda activate cdatm_py2 | ||
| + | start notebook: jupyter notebook --no-browser --port=7225 --ip=cicladNNN | ||
| + | |||
| + | (cdatm_py2) [jypmce@ciclad20 ~]$ jupyter notebook --no-browser --port=7225 --ip=ciclad20 | ||
| + | [I 14:21:05.729 NotebookApp] [nb_conda_kernels] enabled, 5 kernels found | ||
| + | [I 14:21:06.344 NotebookApp] [nb_conda] enabled | ||
| + | [I 14:21:06.352 NotebookApp] Serving notebooks from local directory: /home/jypmce | ||
| + | [I 14:21:06.352 NotebookApp] The Jupyter Notebook is running at: | ||
| + | [I 14:21:06.352 NotebookApp] http://ciclad20:7225/?token=832aa384170471352b2a36444f610e54f2e16fde383a6741 | ||
| + | [I 14:21:06.352 NotebookApp] Use Control-C to stop this server and shut down all kernels (twice to skip confirmation). | ||
| + | [C 14:21:06.365 NotebookApp] | ||
| + | |||
| + | To access the notebook, open this file in a browser: | ||
| + | file:///home/jypmce/.local/share/jupyter/runtime/nbserver-24895-open.html | ||
| + | Or copy and paste one of these URLs: | ||
| + | http://ciclad20:7225/?token=832aa384170471352b2a36444f610e54f2e16fde383a6741 | ||
| + | |||
| + | open in local browser: http://localhost:7225/?token=832aa384170471352b2a36444f610e54f2e16fde383a6741 | ||
| + | </code> | ||
| + | |||
| + | ===== Issues to report ===== | ||
| + | |||
| + | * handling of CLIMAF_LOG_DIR when it is set or not, esp last.out | ||
| + | * rename last.out ? | ||
| + | * problem with cfile when period is not set | ||
| + | * cdo not loaded with 'module load climaf' | ||
| + | * netcdf problems with some files on ciclad20 | ||
| /* standard page footer */ | /* standard page footer */ | ||
other/uvcdat/cdat_conda/climaf_test.1552498472.txt.gz · Last modified: 2019/03/13 17:34 by jypeter
