Differences

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--- other:newppl:starting [2024/07/19 15:24] – [Updating the directory/map information] Improved jypeter
+++ other:newppl:starting [2025/08/07 13:51] (current) – [Miscellaneous information] Added link to GATE desk jypeter
@@ Line 17: / Line 17: @@
   * [[https://www.science-accueil.org/en/|Science Accueil]]
     * [[https://www.science-accueil.org/en/request-services/|Service request page]]
+  * [[https://gate.paris-saclay.fr/en/|GATE desk]]
   * {{:other:newppl:uvsq-guide-du-personnel-nov2019.pdf|Guide du Personnel UVSQ}}
@@ Line 228: / Line 229: @@
   * **[[https://intranet.lsce.ipsl.fr/informatique/en/calcul/batch.php|The LSCE cluster]]** (aka the //batch system//)\\ Use this cluster for **//heavy duty// programs**, rather than killing the multi-users interactive servers
     * //Heavy duty// programs are programs that will prevent other users from working on the same server because these programs use a lot of CPU and/or memory for more than a few minutes. Ask your advisor, if you are not sure
+  * The **''JupyterHub'' notebook servers**:
+    * Read the [[other:python:starting#using_jupyterhub_servers|Using JupyterHub servers]] section of the //Working with Python// page
   * **The [[https://documentations.ipsl.fr/spirit/|IPSL Computing and Data Center]]**, aka //Mésocentre ESPRI// (''Spirit'' / ''SpiritX'' / ''HAL'')
     * Note: the ''Spirit''/''X'' clusters have replaced the ''ciclad''/''climserv'' cluster (in 2022)
     * You will need a specific account (different from your //LSCE// account) to access these servers and use data files that are already available/mirrored there (e.g. **''CMIPn'' data**).\\ **Do not duplicate** at LSCE data  already available on IPSL servers and that you can process there!
-    * [[https://mesocentre.ipsl.fr/account-opening/|Requesting an IPSL account]]
+    * [[https://documentations.ipsl.fr/spirit/getting_started/account.html|Requesting an IPSL account]]
     * [[https://documentations.ipsl.fr/spirit/|IPSL ESPRI Mesocenter documentation]]
       * [[https://documentations.ipsl.fr/spirit/spirit_clusters/head_nodes.html|spirit clusters]]
@@ Line 427: / Line 432: @@
 ===== Which programs should you use? =====
-Your advisor will let you know which (version of which) programs you should use. Some programs are available by default, and you have to use the ''module'' command to access other programs.
+Your advisor will let you know which (version of which) programs you should use. Some programs are available by default, and you have to use the ''[[other:newppl:starting#using_module_to_access_optional_programs|module]]'' command to access other programs (or access a specific version of a program).
 ==== Which program am I using? ====
@@ Line 450: / Line 455: @@
 ==== Using module to access optional programs ====
-Most useful ''[[https://modules.readthedocs.io/|module]]'' options:
+=== Documentation ===
+  * [[https://documentations.ipsl.fr/spirit/common/module_command.html|IPSL Meso documentation]]
+  * [[https://modules.readthedocs.io/|Full and official module documentation]]
+=== Most useful module options ===
   * ''module list'': list the currently loaded modules
   * ''module avail [mod_name]'': list the available modules (or only the ones with a name starting with ''mod_name'')
+  * '' module avail -l 2>&1 | grep subname'': list the modules that have ''subname'' in their name, and their installation date
+    * <wrap hi>This only works in a //bash// shell!</wrap> In a //tcsh// shell, start by invoking a //bash// shell with ''bash -l''
   * ''module load module_a ... module_n'': load modules (automatically including dependencies)
     * ''module load module_a'': load default version of //module_a//
@@ Line 458: / Line 471: @@
   * ''module purge'': remove all modules
-Detailed example:
+=== Detailed example ===
 <code> > which ncview
 ncview: Command not found.
@@ Line 478: / Line 492: @@
  > which ncdump
-/usr/local/install/netcdf-4.3.2/bin/ncdump</code>
+/usr/local/install/netcdf-4.3.2/bin/ncdump
+ > bash -l
+    $ module avail -l 2>&1 | grep gcc
+binutils/2.43.1-gcc14-acc                            2025/01/27 21:09:36
+gcc/14.2.0-openacc                                   2025/01/24  8:11:14
+gcc/8.3.0                                            2021/04/21  8:27:35
+netcdf/4.9.2-gcc14-acc                               2025/01/27 22:02:57
+netcdf/4.9.2-gcc8                                    2024/06/05 20:49:36
+R/4.0.3-gcc8                                         2022/02/03 12:53:55</code>
 ===== Useful documentation for beginners =====
@@ Line 489: / Line 512: @@
   * Useful Linux commands for working with (potentially big) text files ({{:other:newppl:houchesa4_updated.pdf}})
   * Using [[other:ssh|ssh]] and [[other:ssh#copying_files_with_scp|scp]]
+  * See also the //old// [[http://www.idris.fr/formations/utilisation-unix/unix-u-cours.html|IDRIS (advanced) Linux training]] (French tutorial)
 ==== Text editors ====
@@ Line 554: / Line 579: @@
       * Use ''[[#using_module_to_access_optional_programs|module]] load cdo'' on the LSCE and IPSL servers
     * [[http://nco.sourceforge.net/#RTFM|netCDF Operator]] (//NCO// operators)
-      * Use ''[[#using_module_to_access_optional_programs|module]] load cdo'' on the LSCE and IPSL servers
+      * Use ''[[#using_module_to_access_optional_programs|module]] load nco'' on the LSCE and IPSL servers
@@ Line 573: / Line 598: @@
 Check the [[other:python:jyp_steps#using_netcdf_files_with_python|dedicated section]] of the //Python// page
-==== Programming languages ====
+==== Programming languages, parallelism, ... ====
   * [[other:index#python_notes|JYP's Python notes]]
+  * [[http://www.idris.fr/eng/formations/supports_de_cours-eng.html|IDRIS classes and tutorials]]
 ===== Getting help (from the LSCE system administrators) =====