other:uvcdat:cdat_conda:cdat_2_10
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other:uvcdat:cdat_conda:cdat_2_10 [2017/09/01 08:55] jypeter [TODO] vacumm can now be installed in 2.10 |
other:uvcdat:cdat_conda:cdat_2_10 [2018/07/24 12:35] jypeter Added vacumm to the extra package list |
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| * ''conda install -c conda-forge gdal'' | * ''conda install -c conda-forge gdal'' | ||
| * [[https://pcjericks.github.io/py-gdalogr-cookbook/|Python GDAL/OGR Cookbook]] | * [[https://pcjericks.github.io/py-gdalogr-cookbook/|Python GDAL/OGR Cookbook]] | ||
| + | * [[https://github.com/stefraynaud/spanlib|spanlib]]: Spectral Analysis Library | ||
| + | * ''conda install -n cdatm15 -c stefraynaud -c conda-forge spanlib'' | ||
| + | * Test: ''python -c 'from spanlib.analyzer import Analyzer' '' | ||
| + | * [[http://wrf-python.readthedocs.io/en/latest/|wrf-python]]: A collection of diagnostic and interpolation routines for use with output from the Weather Research and Forecasting (WRF-ARW) Model | ||
| + | * ''conda install -n cdatm15 -c conda-forge wrf-python'' | ||
| + | * [[https://glances.readthedocs.io/en/stable/index.html|glances]]: a cross-platform monitoring tool (similar to ''top'') | ||
| + | * ''conda install -n cdatm15 -c conda-forge glances'' | ||
| + | * [[https://github.com/nicolargo/glances|glances@github]] | ||
| + | |||
| ==== TODO ==== | ==== TODO ==== | ||
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| * [[http://www.ifremer.fr/vacumm/|vacumm]]: Validation, Analysis, Comparison - Utilities written in Python to validate and analyze Multi-Model outputs, and compare them to observations | * [[http://www.ifremer.fr/vacumm/|vacumm]]: Validation, Analysis, Comparison - Utilities written in Python to validate and analyze Multi-Model outputs, and compare them to observations | ||
| * As of August 08 2017, installing vacumm in 2.10 requires downgrading to 2.10 (see [[https://github.com/VACUMM/vacumm/issues/9|github issue]])! | * As of August 08 2017, installing vacumm in 2.10 requires downgrading to 2.10 (see [[https://github.com/VACUMM/vacumm/issues/9|github issue]])! | ||
| - | * Problem solved with **vacumm 3.4.1-1** on August 31st! Installation was OK with\\ ''conda install -n cdatm15 -c conda-forge -c vacumm vacumm'' | + | * <wrap hi>Problem solved</wrap> with **vacumm 3.4.1-1** on August 31st! Installation was OK with\\ ''conda install -n cdatm15 -c conda-forge -c vacumm vacumm'' |
| * Install PySPLIT for Sentia\\ [[https://github.com/mscross/pysplit|PySPLIT]] A package for generating HYSPLIT air parcel trajectories trajectories, performing moisture uptake analyses, expediting HYSPLIT cluster analysis, and for visualizing trajectories, clusters, and along-trajectory meteorological data\\ Works with [[https://ready.arl.noaa.gov/HYSPLIT.php|HYSPLiT]] | * Install PySPLIT for Sentia\\ [[https://github.com/mscross/pysplit|PySPLIT]] A package for generating HYSPLIT air parcel trajectories trajectories, performing moisture uptake analyses, expediting HYSPLIT cluster analysis, and for visualizing trajectories, clusters, and along-trajectory meteorological data\\ Works with [[https://ready.arl.noaa.gov/HYSPLIT.php|HYSPLiT]] | ||
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| * NO such packages now! | * NO such packages now! | ||
| + | |||
| + | ==== Updating some packages ==== | ||
| + | |||
| + | Some packages change more often than others, and can be easily updated the following way: | ||
| + | |||
| + | * [[https://cmor.llnl.gov/|CMOR]] | ||
| + | * Update with: ''conda update -n cdatm15 -c conda-forge -c pcmdi -c uvcdat cmor'' | ||
| + | * Get version number with: ''python -c 'from cmor import *; print CMOR_VERSION_MAJOR, CMOR_VERSION_MINOR, CMOR_VERSION_PATCH' '' | ||
| + | |||
| + | * [[https://earthsystemcog.org/projects/wip/CMIP6DataRequest|dreqPy]] | ||
| + | * Update with: ''pip install %%--%%upgrade dreqPy'' | ||
| + | * Get version number with: ''drq -v'' | ||
| ==== Cleaning up things ==== | ==== Cleaning up things ==== | ||
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| * [[http://pythonhosted.org/seawater/|seawater]]: Python re-write of the CSIRO seawater toolbox | * [[http://pythonhosted.org/seawater/|seawater]]: Python re-write of the CSIRO seawater toolbox | ||
| * [[https://pypi.python.org/pypi/gsw/|gsw]]: Python implementation of the Thermodynamic Equation Of Seawater | * [[https://pypi.python.org/pypi/gsw/|gsw]]: Python implementation of the Thermodynamic Equation Of Seawater | ||
| + | * [[http://www.ifremer.fr/vacumm/|vacumm]]: Validation, Analysis, Comparison - Utilities written in Python to validate and analyze Multi-Model outputs, and compare them to observations | ||
| * [[http://unidata.github.io/netcdf4-python/|netcdf4]]: a Python interface to the netCDF C library | * [[http://unidata.github.io/netcdf4-python/|netcdf4]]: a Python interface to the netCDF C library | ||
| * [[http://ferret.pmel.noaa.gov/Ferret/documentation/pyferret|pyferret]]: Ferret encapsulated in | * [[http://ferret.pmel.noaa.gov/Ferret/documentation/pyferret|pyferret]]: Ferret encapsulated in | ||
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| * [[http://scitools.org.uk/iris/index.html|iris]]: A Python library for Meteorology and Climatology | * [[http://scitools.org.uk/iris/index.html|iris]]: A Python library for Meteorology and Climatology | ||
| * [[http://www.gdal.org/|OSGeo/GDAL]]: Geospatial Data Abstraction Library. GDAL is a translator library for raster and vector geospatial data formats | * [[http://www.gdal.org/|OSGeo/GDAL]]: Geospatial Data Abstraction Library. GDAL is a translator library for raster and vector geospatial data formats | ||
| + | * [[https://github.com/stefraynaud/spanlib|spanlib]]: Spectral Analysis Library | ||
| + | * [[http://wrf-python.readthedocs.io/en/latest/|wrf-python]]: A collection of diagnostic and interpolation routines for use with output from the Weather Research and Forecasting (WRF-ARW) Model | ||
| + | * [[https://glances.readthedocs.io/en/stable/index.html|glances]]: a cross-platform monitoring tool (similar to ''top'') | ||
| ==== Removed packages ==== | ==== Removed packages ==== | ||
other/uvcdat/cdat_conda/cdat_2_10.txt · Last modified: 2018/10/03 09:56 by jypeter
