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other:uvcdat:cdat_conda:cdat_8_0_py2 [2018/11/07 17:08] jypeter created |
other:uvcdat:cdat_conda:cdat_8_0_py2 [2018/11/08 09:47] jypeter |
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We have installed a new version of Miniconda3, based on the old [[other:uvcdat:conda_notes#installing_miniconda|installing miniconda]] instructions | We have installed a new version of Miniconda3, based on the old [[other:uvcdat:conda_notes#installing_miniconda|installing miniconda]] instructions | ||
- | * Follow the [[https://conda.io/docs/install/quick.html|Quick install]] steps to install Miniconda | + | * Follow the [[https://conda.io/docs/install/quick.html|Quick install]] steps to install Miniconda |
* Get the [[https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh|Python 3.7 Linux 64-bit (bash installer)]] (unless there is a [[https://conda.io/miniconda.html|more recent version?]]) | * Get the [[https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh|Python 3.7 Linux 64-bit (bash installer)]] (unless there is a [[https://conda.io/miniconda.html|more recent version?]]) | ||
* ''cd /home/scratch01/jypeter'' (some temporary storage space for the installer) | * ''cd /home/scratch01/jypeter'' (some temporary storage space for the installer) | ||
Line 44: | Line 44: | ||
12K x86_64-conda_cos6-linux-gnu</code> | 12K x86_64-conda_cos6-linux-gnu</code> | ||
* Accept the automatic update of the //PATH// variable in ''.bashrc'' (note: the installer automatically creates a backup of ''.bashrc'') | * Accept the automatic update of the //PATH// variable in ''.bashrc'' (note: the installer automatically creates a backup of ''.bashrc'') | ||
- | * ''# added by Miniconda2 4.3.21 installer''\\ ''export PATH="/home/share/unix_files/cdat/miniconda2/bin:$PATH"'' | + | * ''# added by Miniconda3 installer''\\ ''export PATH="/home/share/unix_files/cdat/miniconda3/bin:$PATH"'' |
- | * Open a new terminal (if you use bash) or type ''bash'' and check if the python from the conda distribution has been correctly installed | + | * Open a new terminal (if you use bash) or open a new terminal and type ''bash'' |
- | * Update and clean the new installation | + | * check if the python from the conda distribution has been correctly installed\\ <code> > bash |
- | * ''conda update %%--%%all'' | + | $ which python |
- | * ''conda clean %%--%%all'' | + | /home/share/unix_files/cdat/miniconda3/bin/python |
- | * <code>bash-4.1$ which python | + | $ which conda |
- | /home/share/unix_files/cdat/miniconda2/bin/python | + | /home/share/unix_files/cdat/miniconda3/bin/conda</code> |
- | bash-4.1$ du -sh /home/share/unix_files/cdat/miniconda2 | + | * Update and clean the new installation\\ <code>$ conda update --all |
- | 114M /home/share/unix_files/cdat/miniconda2 | + | $ du -sh /home/share/unix_files/cdat/miniconda3 |
- | bash-4.1$ conda list | + | 515M /home/share/unix_files/cdat/miniconda3 |
- | # packages in environment at /home/share/unix_files/cdat/miniconda2: | + | $ conda clean --all |
+ | $ du -sh /home/share/unix_files/cdat/miniconda3 | ||
+ | 270M /home/share/unix_files/cdat/miniconda3 | ||
+ | $ conda list | ||
+ | # packages in environment at /home/share/unix_files/cdat/miniconda3: | ||
# | # | ||
- | cffi 1.9.1 py27_0 | + | # Name Version Build Channel |
- | conda 4.3.13 py27_0 | + | |
- | conda-env 2.6.0 0 | + | |
- | cryptography 1.7.1 py27_0 | + | |
[...] | [...] | ||
+ | python 3.7.1 h0371630_3 | ||
+ | readline 7.0 h7b6447c_5 | ||
+ | requests 2.20.0 py37_0 | ||
+ | [...]</code> | ||
+ | * Remove the miniconda3 initialization lines automatically added at the end of ''.bashrc'' and put them (and other useful commands) in a special initialization file, that can be sourced only when we actually want to use conda and CDAT | ||
- | <note important>\\ We used the [[other:uvcdat:cdat_conda:cdat_2_8_0#downgrading_conda|recommended downgraded version of conda]] that was available after installing UV-CDAT 2.8</note> | + | Disk space used before 2.10 installation (after running ''conda clean --all'') |
- | + | ||
- | DIsk space used before 2.10 installation (after running ''conda clean --all'') | + | |
<code> > du -sh /home/share/unix_files/cdat/miniconda2 | <code> > du -sh /home/share/unix_files/cdat/miniconda2 |