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other:uvcdat:cdat_conda:cdat_8_0_py2 [2018/11/13 17:21] jypeter Added details for activating conda |
other:uvcdat:cdat_conda:cdat_8_0_py2 [2019/02/27 10:54] jypeter |
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==== Installing Miniconda3 ==== | ==== Installing Miniconda3 ==== | ||
- | We have installed a new version of Miniconda3, by following the existing [[other:uvcdat:conda_notes#installing_miniconda|installing miniconda]] instructions | + | We have installed a new version of Miniconda3 (steps below adapated from the [[other:uvcdat:conda_notes#installing_miniconda|installing miniconda]] instructions) |
- | * Follow the [[https://conda.io/docs/install/quick.html|Quick install]] steps to install Miniconda | + | |
- | * Get the [[https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh|Python 3.7 Linux 64-bit (bash installer)]] (unless there is a [[https://conda.io/miniconda.html|more recent version?]]) | + | * Get the [[https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh|Python 3.7 Linux 64-bit (bash installer)]] (unless there is a [[https://conda.io/miniconda.html|more recent version?]]) |
- | * ''cd /home/scratch01/jypeter'' (some temporary storage space for the installer) | + | * ''cd /home/scratch01/jypeter'' (some temporary storage space for the installer) |
- | * ''wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh'' (60 Mo, 11 Nov 2018) | + | * ''wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh'' (67 Mo, 15 Feb 2019) |
- | * Execute the installer | + | * Execute the installer |
- | * ''bash Miniconda3-latest-Linux-x86_64.sh'' | + | * ''bash Miniconda3-latest-Linux-x86_64.sh'' |
- | * Accept the license | + | * Accept the license |
- | * Specify an explicit installation path **outside of the home directory**, with enough disk space (more than 3G if you are going to install UV-CDAT and some extra packages), preferably on a disk that is not backed up: ''/home/share/unix_files/cdat/miniconda3'' | + | * Specify an explicit installation path **outside of the home directory**, with enough disk space (more than 3G if you are going to install UV-CDAT and some extra packages), preferably on a disk that is not backed up: ''/home/share/unix_files/cdat/miniconda3'' |
- | * Resulting ''miniconda3'' directory size is 302M\\ <code> >du -sh miniconda3 | + | * Resulting ''miniconda3'' directory size is 302M\\ <code> >du -sh miniconda3 |
302M miniconda3 | 302M miniconda3 | ||
>cd miniconda3 | >cd miniconda3 | ||
Line 45: | Line 45: | ||
92K ssl | 92K ssl | ||
12K x86_64-conda_cos6-linux-gnu</code> | 12K x86_64-conda_cos6-linux-gnu</code> | ||
- | * Accept the automatic update of the //PATH// variable in ''.bashrc'' (note: the installer automatically creates a backup of ''.bashrc'') | + | * Accept the automatic update of the //PATH// variable in ''.bashrc'' (note: the installer automatically creates a backup of ''.bashrc'') |
- | * ''# added by Miniconda3 installer''\\ ''export PATH="/home/share/unix_files/cdat/miniconda3/bin:$PATH"'' | + | * ''# added by Miniconda3 installer''\\ ''export PATH="/home/share/unix_files/cdat/miniconda3/bin:$PATH"'' |
- | * Open a new terminal (if you use bash) or open a new terminal and type ''bash'' | + | * Open a new terminal (if you use bash) or open a new terminal and type ''bash'' |
- | * check if the python from the conda distribution has been correctly installed\\ <code> > bash | + | * check if the python from the conda distribution has been correctly installed\\ <code> > bash |
$ which python | $ which python | ||
/home/share/unix_files/cdat/miniconda3/bin/python | /home/share/unix_files/cdat/miniconda3/bin/python | ||
$ which conda | $ which conda | ||
/home/share/unix_files/cdat/miniconda3/bin/conda</code> | /home/share/unix_files/cdat/miniconda3/bin/conda</code> | ||
- | * Update and clean the new installation\\ <code>$ conda update --all | + | * Update and clean the new installation\\ <code>$ conda update --all |
$ du -sh /home/share/unix_files/cdat/miniconda3 | $ du -sh /home/share/unix_files/cdat/miniconda3 | ||
515M /home/share/unix_files/cdat/miniconda3 | 515M /home/share/unix_files/cdat/miniconda3 |