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--- other:uvcdat:cdat_conda:cdat_8_0_py2 [2019/03/06 10:18] – jypeter
+++ other:uvcdat:cdat_conda:cdat_8_0_py2 [2021/02/26 19:31] – Improved... jypeter
@@ Line 18: / Line 18: @@
 ==== Installing Miniconda3 ====
-We have installed a new version of Miniconda3 (steps below adapted from the [[other:uvcdat:conda_notes#installing_miniconda|installing miniconda]] instructions)
+  * You don't need to be (and **you should not be**) //root// when you install Miniconda3. You just need enough disk space where you have write access
+  * If you are installing Miniconda3 in a Linux environment on a [[other:win10wsl|Windows 10 computer using Windows Subsystem for Linux (WSL)]], pay special attention to the instructions on the **WSL** lines
-  * Get the [[https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh|Python 3.7 Linux 64-bit (bash installer)]] (unless there is a [[https://conda.io/miniconda.html|more recent version?]])
+The steps below are adapted from the older (but with lots of extra and possibly useful details) [[other:uvcdat:conda_notes#installing_miniconda|installing miniconda]] instructions
-    * Find some temporary space on Linux or Windows
-      * Linux:''cd /home/scratch01/jypeter''
+  * Get the [[https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh|Python 3.8 Linux 64-bit (bash installer)]] (unless there is a [[https://conda.io/miniconda.html|more recent version?]])
-      * WSL: ''cd /mnt/h/Scratch/jypeter/'' (assuming that there is a ''H:\Scratch\jypeter'' directory)
+    * Find some temporary space on Linux (or Windows, if you are using WSL)
-    * ''wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh'' (67 Mo, 15 Feb 2019)
+      * e.g. Linux at LSCE:\\ ''cd /home/scratch01/<your_login>''
+      * e.g. WSL, assuming that there is a ''C:\Scratch\<your_login>'' directory:\\ ''cd /mnt/c/Scratch/<your_login>''
+    * Use ''wget'' to download the installer:\\ ''wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh'' (90 Mb, 26 Feb 2021)
   * Execute the installer
     * ''bash Miniconda3-latest-Linux-x86_64.sh''
       * Accept the license
-      * Specify an explicit installation path **outside of the home directory**, with enough disk space (more than 3G if you are going to install UV-CDAT and some extra packages), preferably on a disk that is not backed up:
+      * Specify an explicit installation path **outside of your //home// directory**, with enough disk space (more than 3 Gb if you are going to install CDAT and some extra packages), preferably on a disk that is not backed up:
-        * Linux LSCE: ''/home/share/unix_files/cdat/miniconda3''
+        * Installations by //JYP//:
-        * Linux ciclad: ''/data/jypmce/cdat/miniconda3''
+          * Linux at LSCE: ''/home/share/unix_files/cdat/miniconda3'', or another subdirectory of ''/home/share/unix_files/cdat/''
+          * Linux on ciclad: ''/data/jypmce/cdat/miniconda3'', or another subdirectory of ''/data/jypmce/cdat/''
         * WSL: installing to a directory that is not in ''/home/'' <wrap hi>does not work</wrap> (e.g. ''/mnt/h/CDAT/miniconda3'',assuming there is a ''H:\CDAT\'' directory, does not work)\\ Need to accept the installation in the default location: ''/home/jypeter/miniconda3''
         * Resulting ''miniconda3'' directory size is 302M\\ <code> >du -sh miniconda3
@@ Line 382: / Line 386: @@
     * ''conda install -n cdatm17_py2 -c stefraynaud -c conda-forge spanlib''
     * Test: ''python -c 'from spanlib.analyzer import Analyzer' ''
+  * [[https://climaf.readthedocs.io/en/latest/|CliMAF]]: a Climate Model Assessment Framework
+    * [[other:uvcdat:cdat_conda:climaf_install|Installation notes]]
 ==== TODO ====
@@ Line 391: / Line 398: @@
   * [[http://wrf-python.readthedocs.io/en/latest/|wrf-python]]: A collection of diagnostic and interpolation routines for use with output from the Weather Research and Forecasting (WRF-ARW) Model
-    * ''conda install -n cdatm15 -c conda-forge wrf-python''
+    * ''conda install -n cdatxxx -c conda-forge wrf-python''
   * [[https://glances.readthedocs.io/en/stable/index.html|glances]]: a cross-platform monitoring tool (similar to ''top'')
-    * ''conda install -n cdatm15 -c conda-forge glances''
+    * ''conda install -n cdatxxx -c conda-forge glances''
     * [[https://github.com/nicolargo/glances|glances@github]]
@@ Line 408: / Line 415: @@
   * [[https://cmor.llnl.gov/|CMOR]]
-    * Update with: ''conda update -n cdatm15 -c conda-forge -c pcmdi -c uvcdat cmor''
+    * Update with: ''conda update -n cdatxxx -c conda-forge -c pcmdi -c uvcdat cmor''
       * Get version number with: ''python -c 'from cmor import *; print CMOR_VERSION_MAJOR, CMOR_VERSION_MINOR, CMOR_VERSION_PATCH' ''
@@ Line 468: / Line 475: @@
 </code>
   * Open a new shell and <wrap em>run the tests again</wrap>. If there is an error that was not there, check what you have added to the shell init files
+  * [[other:uvcdat:cdat_conda:climaf_test|Test CLIMAF on ciclad]]
 ==== Cleaning up things ====
@@ Line 515: / Line 523: @@
 ^  Environment\\ name  ^  Server  ^  ''conda list''  ^
-| cdat-8.0_py2 |  LSCE\\ ciclad  | |
+| cdat-8.0_py2 |  LSCE  | |
-| cdatm17_py2 |  LSCE\\ ciclad  | |
+| cdatm17_py2 |  LSCE | |
 | cdat-nightly_py2 |  LSCE\\ ciclad  | |
 | cdatm-nightly_py2 |  LSCE\\ ciclad  | |