other:uvcdat:cdat_conda:cdat_8_1
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other:uvcdat:cdat_conda:cdat_8_1 [2019/04/26 09:56] jypeter [CDAT 8.1 installation notes] Added link to Working with Python |
other:uvcdat:cdat_conda:cdat_8_1 [2020/01/23 10:44] jypeter [Using JYP version] |
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| If you mostly want to use the CDAT 8.1 installed by JYP, just use the following steps and skip the next sections: | If you mostly want to use the CDAT 8.1 installed by JYP, just use the following steps and skip the next sections: | ||
| - | * Initialize conda: | + | * Initialize //conda// with: |
| ^ Server ^ tcsh ^ bash ^ | ^ Server ^ tcsh ^ bash ^ | ||
| Line 18: | Line 18: | ||
| | ciclad | ''source ~jypmce/.conda3_jyp.csh'' | ''source ~jypmce/.conda3_jyp.sh'' | | | ciclad | ''source ~jypmce/.conda3_jyp.csh'' | ''source ~jypmce/.conda3_jyp.sh'' | | ||
| - | * Activate the default environment: ''conda activate cdatm_py2'' | + | * Choose one of the [[#environments_summary|installed environments]] and activate it with: ''conda activate env_name'' |
| - | * Check the [[#environments_summary|Available environments]] for more options | + | * python 2.7.x: ''conda activate cdatm_py2'' |
| + | * python 3.x: ''conda activate cdatm_py3'' (not available on ciclad, but could be installed) | ||
| ===== What's New? ===== | ===== What's New? ===== | ||
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| * Get version number with:\\ <code>$ drq -v | * Get version number with:\\ <code>$ drq -v | ||
| dreqPy version 01.00.29 [Version 01.00.29]</code> | dreqPy version 01.00.29 [Version 01.00.29]</code> | ||
| + | |||
| + | * [[https://github.com/PBrockmann/ipython_ferretmagic|ipython_ferretmagic]]: IPython notebook extension for ferret | ||
| + | * ''conda activate cdatm18_py2''\\ ''pip install ferretmagic'' | ||
| The following packages have no dependency problems and were installed (or updated) //later// | The following packages have no dependency problems and were installed (or updated) //later// | ||
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| * [[https://climaf.readthedocs.io/en/latest/|CliMAF]]: a Climate Model Assessment Framework | * [[https://climaf.readthedocs.io/en/latest/|CliMAF]]: a Climate Model Assessment Framework | ||
| * [[other:uvcdat:cdat_conda:climaf_install|Installation notes]] | * [[other:uvcdat:cdat_conda:climaf_install|Installation notes]] | ||
| + | |||
| + | * [[https://jiffyclub.github.io/palettable/|Palettable]]: Color palettes for Python | ||
| + | * ''conda install -n cdatm18_py2 -c conda-forge palettable'' | ||
| ==== TODO ==== | ==== TODO ==== | ||
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| * [[http://www.ifremer.fr/vacumm/|vacumm]]: Validation, Analysis, Comparison - Utilities written in Python to validate and analyze Multi-Model outputs, and compare them to observations | * [[http://www.ifremer.fr/vacumm/|vacumm]]: Validation, Analysis, Comparison - Utilities written in Python to validate and analyze Multi-Model outputs, and compare them to observations | ||
| * [[http://unidata.github.io/netcdf4-python/|netcdf4]]: a Python interface to the netCDF C library | * [[http://unidata.github.io/netcdf4-python/|netcdf4]]: a Python interface to the netCDF C library | ||
| - | * [[http://ferret.pmel.noaa.gov/Ferret/documentation/pyferret|pyferret]]: Ferret encapsulated in | + | * [[http://ferret.pmel.noaa.gov/Ferret/documentation/pyferret|pyferret]]: Ferret encapsulated in Python |
| + | * [[https://github.com/PBrockmann/ipython_ferretmagic|ipython_ferretmagic]]: IPython notebook extension for ferret | ||
| * [[https://github.com/conda-forge/basemap-data-hires-feedstock|basemap-data-hires]]: high resolution data for ''basemap'' | * [[https://github.com/conda-forge/basemap-data-hires-feedstock|basemap-data-hires]]: high resolution data for ''basemap'' | ||
| * [[https://github.com/PCMDI/pcmdi_metrics|PCMDI metrics package]] (PMP): objectively compare results from climate models with observations using well-established statistical tests | * [[https://github.com/PCMDI/pcmdi_metrics|PCMDI metrics package]] (PMP): objectively compare results from climate models with observations using well-established statistical tests | ||
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| * [[https://climaf.readthedocs.io/en/latest/|CliMAF]]: a Climate Model Assessment Framework | * [[https://climaf.readthedocs.io/en/latest/|CliMAF]]: a Climate Model Assessment Framework | ||
| * [[https://joblib.readthedocs.io/en/latest/|joblib]]: running Python functions as pipeline jobs | * [[https://joblib.readthedocs.io/en/latest/|joblib]]: running Python functions as pipeline jobs | ||
| + | * [[https://jiffyclub.github.io/palettable/|Palettable]]: Color palettes for Python | ||
| ==== Removed packages ==== | ==== Removed packages ==== | ||
other/uvcdat/cdat_conda/cdat_8_1.txt · Last modified: 2021/03/26 09:10 by jypeter
