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other:python:jyp_steps [2016/01/29 15:41]
jypeter Added the numpy for matlab users references
other:python:jyp_steps [2016/02/18 11:02]
jypeter Started the debug section
Line 49: Line 49:
 Where: [[http://​docs.scipy.org/​doc/​|html and pdf documentation]] Where: [[http://​docs.scipy.org/​doc/​|html and pdf documentation]]
  
-How to get started?+==== Getting ​started ​==== 
   - always remember that indices start at ''​0''​ and that the last element of an array is at index ''​-1''​!\\ First learn about //​indexing//​ and //slicing// by manipulating strings, as shown in [[#​part1|Part 1]] above (try '''​This document by JY is awesome!'​[::​-1]''​ and '''​This document by JY is awesome!'​[slice(None,​ None, -1)]''​) 8-)   - always remember that indices start at ''​0''​ and that the last element of an array is at index ''​-1''​!\\ First learn about //​indexing//​ and //slicing// by manipulating strings, as shown in [[#​part1|Part 1]] above (try '''​This document by JY is awesome!'​[::​-1]''​ and '''​This document by JY is awesome!'​[slice(None,​ None, -1)]''​) 8-)
   - if you are a Matlab user (but the references are interesting for others as well), you can read the following:   - if you are a Matlab user (but the references are interesting for others as well), you can read the following:
Line 59: Line 60:
     - Numpy Reference Guide     - Numpy Reference Guide
     - Scipy Reference Guide     - Scipy Reference Guide
 +
 +==== Beware of the array view side effects ====
 +
 +<note warning>​When you take a slice of an array, you get a **//​View//​** : an array that has a new shape but that still shares its data with the first array.
 +
 +That is not a problem when you only read the values, but **if you change the values of the //View//, you change the values of the first array** (and vice-versa)! If that is not what want, do not forget to **make a copy** of the data before working on it!
 +
 +//Views// are a good thing most of the time, so only make a copy of your data when needed, because otherwise copying a big array will just be a waste of CPU and computer memory. Anyway, it is always better to understand what you are doing... :-P
 +
 +Check the example below and the [[https://​docs.scipy.org/​doc/​numpy-dev/​user/​quickstart.html#​copies-and-views|copies and views]] part of the quickstart tutorial.
 +
 +<code python>
 +>>>​ import numpy as np
 +>>>​ a = np.arange(30).reshape((3,​10))
 +>>>​ a
 +array([[ 0,  1,  2,  3,  4,  5,  6,  7,  8,  9],
 +       [10, 11, 12, 13, 14, 15, 16, 17, 18, 19],
 +       [20, 21, 22, 23, 24, 25, 26, 27, 28, 29]])
 +
 +>>>​ b = a[1, :]
 +>>>​ b
 +array([10, 11, 12, 13, 14, 15, 16, 17, 18, 19])
 +
 +>>>​ b[3:7] = 0
 +>>>​ b
 +array([10, 11, 12,  0,  0,  0,  0, 17, 18, 19])
 +
 +>>>​ a
 +array([[ 0,  1,  2,  3,  4,  5,  6,  7,  8,  9],
 +       [10, 11, 12,  0,  0,  0,  0, 17, 18, 19],
 +       [20, 21, 22, 23, 24, 25, 26, 27, 28, 29]])
 +       
 +>>>​ a[:, 2:4] = -1
 +>>>​ a
 +array([[ 0,  1, -1, -1,  4,  5,  6,  7,  8,  9],
 +       [10, 11, -1, -1,  0,  0,  0, 17, 18, 19],
 +       [20, 21, -1, -1, 24, 25, 26, 27, 28, 29]])
 +       
 +>>>​ b
 +array([10, 11, -1, -1,  0,  0,  0, 17, 18, 19])
 +
 +>>>​ c = a[1, :].copy()
 +>>>​ c
 +array([10, 11, -1, -1,  0,  0,  0, 17, 18, 19])
 +
 +>>>​ c[:] = 9
 +>>>​ c
 +array([9, 9, 9, 9, 9, 9, 9, 9, 9, 9])
 +
 +>>>​ b
 +array([10, 11, -1, -1,  0,  0,  0, 17, 18, 19])
 +
 +>>>​ a
 +array([[ 0,  1, -1, -1,  4,  5,  6,  7,  8,  9],
 +       [10, 11, -1, -1,  0,  0,  0, 17, 18, 19],
 +       [20, 21, -1, -1, 24, 25, 26, 27, 28, 29]])
 +</​code></​note>​
  
 ===== cdms2 and netCDF4 ===== ===== cdms2 and netCDF4 =====
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   * [[http://​blog.codinghorror.com/​a-pragmatic-quick-reference/​|A Pragmatic Quick Reference]]   * [[http://​blog.codinghorror.com/​a-pragmatic-quick-reference/​|A Pragmatic Quick Reference]]
 +
 +===== Debugging your code =====
 +
 +There is only so much you can do with staring at your code in your favorite text editor, and adding ''​print''​ lines in your code (or [[https://​docs.python.org/​2/​howto/​logging.html#​logging-basic-tutorial|using logging]] instead of ''​print''​). The next step is to use the python debugger!
 +
 +==== Debugging in text mode ====
 +
 +==== Using pydebug ====
 +
  
 ===== Improving the performance of your code ===== ===== Improving the performance of your code =====
other/python/jyp_steps.txt · Last modified: 2024/03/07 10:15 by jypeter