Differences

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--- other:uvcdat:extra [2015/10/20 16:35] – Added find_agg jypeter
+++ other:uvcdat:extra [2016/06/01 13:52] (current) – Added scikit-learn jypeter
@@ Line 3: / Line 3: @@
 This page lists the packages (usually) installed in the LSCE-IPSL CDAT versions that are not available in the standard UV-CDAT (i.e. there are no //ccmake// configuration switches to get them installed).
+===== pip related notes =====
+[[http://python-packaging-user-guide.readthedocs.io/en/develop/|pip documentation]]
+<note important>You may need to do some cleaning, in order to be sure that pip is not going to get something from its installation cache! Go check the content of ''/tmp/pip-build/''...</note>
+  * To install the latest version of “SomeProject”:\\ ''pip install 'SomeProject' ''
+  * To install a specific version:\\ ''pip install 'SomeProject==1.4' ''
+  * To upgrade an installed version:\\ ''pip install SomeProject %%--%%upgrade''
 ===== Requests =====
@@ Line 205: / Line 215: @@
 ==== Testing ====
-Check the installed version with: ''which geos-config'' and ''geos-config --version''
+Check the installed version with: ''which geos-config'' and ''geos-config %%--version%%''
 ===== pyshp =====
@@ Line 255: / Line 265: @@
 Check the installed version with: ''rpm -qa | grep '^proj' ''
+===== spectrum =====
+  * Web site:
+    * http://pythonhosted.org/spectrum/
+    * https://github.com/cokelaer/spectrum
+==== Versions installed ====
+^  UV-CDAT\\ version  ^  JYP\\ installation  ^  Package\\ version  ^  Date  ^
+|  2.1.0  |  LSCE_13  |  0.6.1  |  Apr 14 2016  |
+==== Installing ====
+  * ''pip install spectrum''
+==== Testing ====
+Check the installed version with: ''python -c 'import spectrum' ''
+===== statsmodels =====
+  * Web site: http://statsmodels.sourceforge.net/stable/index.html
+==== Versions installed ====
+^  UV-CDAT\\ version  ^  JYP\\ installation  ^  Package\\ version  ^  Date  ^
+|  2.1.0  |  LSCE_13  |  0.6.1  |  Apr 14 2016  |
+==== Installing ====
+  * ''pip install statsmodels''
+==== Testing ====
+Check the installed version with: ''python -c 'import statsmodels; print statsmodels.version.version' ''
+===== seaborn =====
+  * Web site: https://stanford.edu/~mwaskom/software/seaborn/index.html
+==== Versions installed ====
+^  UV-CDAT\\ version  ^  JYP\\ installation  ^  Package\\ version  ^  Date  ^
+|  2.1.0  |  LSCE_13  |  0.7.0  |  Apr 14 2016  |
+==== Installing ====
+  * ''pip install seaborn''
+==== Testing ====
+Check the installed version with: ''python -c 'import seaborn; print seaborn.%%__version__%%' ''
+===== scikit-image =====
+  * Web site: http://scikit-image.org/
+==== Versions installed ====
+^  UV-CDAT\\ version  ^  JYP\\ installation  ^  Package\\ version  ^  Date  ^
+|  1.5.1  |  LSCE_10  |  0.8.2\\ Newer versions fail because we have Cython 0.16, but require >= 0.21  |  Jun 01 2016  |
+|  2.1.0  |  LSCE_13  |  0.8.2\\ Newer versions fail because we have Cython 0.16, but require >= 0.21  |  Jun 01 2016  |
+==== Installing ====
+  * for CDAT up to 2.1.0: ''pip install 'scikit-image==0.8.2' ''
+==== Testing ====
+Check the installed version with: ''python -c 'import skimage; print skimage.%%__version__%%' ''
+===== scikit-learn =====
+  * Web site: http://scikit-learn.org/stable/
+==== Versions installed ====
+^  UV-CDAT\\ version  ^  JYP\\ installation  ^  Package\\ version  ^  Date  ^
+|  1.5.1  |  LSCE_10  |  0.17.1  |  Jun 01 2016  |
+|  2.1.0  |  LSCE_13  |  0.17.1  |  Jun 01 2016  |
+==== Installing ====
+  * ''pip install scikit-learn''
+==== Testing ====
+Check the installed version with: ''python -c 'import sklearn; print sklearn.%%__version__%%' ''